STRINGSTRING
Slin_1617 protein (Spirosoma linguale) - STRING interaction network
"Slin_1617" - Thioesterase superfamily protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1617Thioesterase superfamily protein (136 aa)    
Predicted Functional Partners:
Slin_1618
Aminodeoxychorismate lyase (345 aa)
              0.880
Slin_1616
Ribonuclease BN (318 aa)
              0.798
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA (313 aa)
   
      0.746
Slin_5148
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (79 aa)
     
 
  0.742
Slin_4413
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
     
 
  0.742
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (1130 aa)
     
      0.703
Slin_1619
Hypothetical protein (139 aa)
              0.497
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (216 aa)
 
          0.486
Slin_5938
MotA/TolQ/ExbB proton channel (236 aa)
   
 
  0.479
Slin_5087
MotA/TolQ/ExbB proton channel (277 aa)
   
 
  0.479
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]