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Slin_1629 protein (Spirosoma linguale) - STRING interaction network
"Slin_1629" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1629Hypothetical protein (354 aa)    
Predicted Functional Partners:
Slin_5950
Hypothetical protein (400 aa)
 
          0.778
Slin_5949
Hypothetical protein (1152 aa)
   
          0.778
Slin_5163
Transcriptional regulator (774 aa)
   
          0.778
Slin_3042
Response regulator receiver protein (524 aa)
   
          0.774
Slin_3426
Hypothetical protein (496 aa)
   
          0.769
Slin_6621
Hypothetical protein (2541 aa)
   
          0.768
Slin_3752
Hypothetical protein (490 aa)
   
          0.768
Slin_1304
Hypothetical protein (301 aa)
   
          0.765
Slin_3618
Histidine kinase (397 aa)
   
          0.763
Slin_3226
Hypothetical protein (324 aa)
   
          0.761
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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