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Slin_1635 protein (Spirosoma linguale) - STRING interaction network
"Slin_1635" - Crp/Fnr family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1635Crp/Fnr family transcriptional regulator (193 aa)    
Predicted Functional Partners:
Slin_0259
Crp/Fnr family transcriptional regulator (179 aa)
   
          0.740
Slin_0859
Crp/Fnr family transcriptional regulator (133 aa)
   
          0.733
Slin_3259
Crp/Fnr family transcriptional regulator (194 aa)
   
          0.649
Slin_1634
Hypothetical protein (236 aa)
              0.626
Slin_1633
NmrA family protein (330 aa)
              0.619
Slin_1636
Class III aminotransferase (403 aa)
              0.442
Slin_5878
Peptidase S41 (494 aa)
   
          0.401
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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