STRINGSTRING
Slin_1641 protein (Spirosoma linguale) - STRING interaction network
"Slin_1641" - Peptidase M23 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1641Peptidase M23 (286 aa)    
Predicted Functional Partners:
Slin_0978
Peptidase M23 (689 aa)
   
          0.770
Slin_1640
Sodium solute transporter (566 aa)
              0.625
Slin_1639
Hypothetical protein (41 aa)
              0.625
Slin_4394
Carboxyl-terminal protease (575 aa)
 
 
  0.611
Slin_3923
Carboxyl-terminal protease (557 aa)
 
 
  0.587
Slin_3220
Glycosyl transferase family protein (785 aa)
 
 
      0.528
Slin_6521
Carboxyl-terminal protease (709 aa)
   
 
  0.480
Slin_5713
Peptidase S41; Degrades oligopeptides (1097 aa)
   
 
  0.480
Slin_2089
Peptidase S41 (341 aa)
   
 
  0.480
Slin_1638
Hypothetical protein (301 aa)
              0.468
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]