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Slin_1645 protein (Spirosoma linguale) - STRING interaction network
"Slin_1645" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1645Hypothetical protein (300 aa)    
Predicted Functional Partners:
Slin_0742
LmbE family protein (882 aa)
 
          0.781
Slin_1640
Sodium solute transporter (566 aa)
   
          0.699
Slin_1646
NUDIX hydrolase (178 aa)
              0.651
bshC
Hypothetical protein (515 aa)
   
          0.649
Slin_3484
Group 1 glycosyl transferase (379 aa)
 
          0.647
Slin_4515
Hypothetical protein (166 aa)
   
          0.589
Slin_2914
TonB-dependent receptor plug (800 aa)
   
          0.589
Slin_0030
TonB-dependent receptor plug (786 aa)
   
          0.589
Slin_5948
Hypothetical protein (204 aa)
   
          0.588
Slin_2829
TonB-dependent receptor plug (803 aa)
   
          0.563
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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