STRINGSTRING
Slin_1649 protein (Spirosoma linguale) - STRING interaction network
"Slin_1649" - Nitrilase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1649Nitrilase (301 aa)    
Predicted Functional Partners:
Slin_5139
Glutamate--ammonia ligase (457 aa)
       
  0.913
Slin_2432
Glutamate--ammonia ligase (344 aa)
       
  0.913
Slin_3069
Aldehyde dehydrogenase (508 aa)
       
  0.910
Slin_1742
Aldehyde dehydrogenase (476 aa)
       
  0.910
Slin_5648
Glu/Leu/Phe/Val dehydrogenase (424 aa)
   
 
  0.907
Slin_3918
Amidase (519 aa)
       
  0.906
Slin_3846
Amidase (540 aa)
       
  0.906
Slin_5407
Nitrite reductase (NAD(P)H) small subunit (117 aa)
     
 
    0.903
Slin_2431
Glutamine synthetase (729 aa)
       
    0.900
Slin_5406
Nitrite reductase (NAD(P)H) large subunit (837 aa)
         
    0.900
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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