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Slin_1658 protein (Spirosoma linguale) - STRING interaction network
"Slin_1658" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1658Hypothetical protein (1039 aa)    
Predicted Functional Partners:
Slin_1797
Exodeoxyribonuclease V (1120 aa)
 
     
  0.861
Slin_5683
Hypothetical protein (330 aa)
   
          0.740
Slin_2040
Sporulation domain-containing protein (380 aa)
   
          0.676
Slin_1298
Hypothetical protein (434 aa)
   
          0.660
Slin_1687
Hypothetical protein (751 aa)
   
          0.655
Slin_1983
Hypothetical protein (130 aa)
   
          0.653
Slin_3080
Hypothetical protein (1564 aa)
   
          0.617
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.614
Slin_0989
Hypothetical protein (188 aa)
   
          0.611
Slin_1382
Smr protein/MutS2 (340 aa)
   
          0.609
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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