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Slin_1684 protein (Spirosoma linguale) - STRING interaction network
"Slin_1684" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1684Hypothetical protein (135 aa)    
Predicted Functional Partners:
Slin_0992
Surface antigen (D15) (875 aa)
   
          0.717
Slin_2266
Alanine racemase (835 aa)
   
          0.700
Slin_5551
Peptidase M28 (343 aa)
   
          0.658
Slin_2875
Hypothetical protein (843 aa)
   
          0.628
Slin_6012
Hypothetical protein (297 aa)
   
          0.619
Slin_5660
Outer membrane chaperone Skp (198 aa)
   
          0.599
Slin_4064
Hypothetical protein (180 aa)
   
          0.586
Slin_1111
GSCFA domain-containing protein (338 aa)
   
          0.586
Slin_6385
Hypothetical protein (694 aa)
   
          0.580
Slin_3752
Hypothetical protein (490 aa)
   
          0.563
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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