STRINGSTRING
Slin_1689 protein (Spirosoma linguale) - STRING interaction network
"Slin_1689" - DNA uptake protein-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1689DNA uptake protein-like protein (329 aa)    
Predicted Functional Partners:
Slin_1691
SMC domain-containing protein (378 aa)
              0.709
Slin_1690
Hypothetical protein (158 aa)
              0.709
Slin_1307
Outer membrane assembly lipoprotein YfiO (299 aa)
   
          0.688
Slin_1528
Hypothetical protein (984 aa)
   
          0.667
Slin_0436
Hypothetical protein (429 aa)
 
          0.656
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (230 aa)
   
          0.652
Slin_0992
Surface antigen (D15) (875 aa)
   
          0.613
Slin_1920
ComEC/Rec2-like protein (708 aa)
 
   
  0.583
Slin_3080
Hypothetical protein (1564 aa)
   
          0.580
Slin_5854
Outer membrane lipoprotein carrier protein LolA (213 aa)
   
          0.557
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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