STRINGSTRING
Slin_1699 protein (Spirosoma linguale) - STRING interaction network
"Slin_1699" - Methionine gamma-lyase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1699Methionine gamma-lyase (402 aa)    
Predicted Functional Partners:
Slin_5829
Cystathionine beta-synthase (458 aa)
  0.975
Slin_5857
Cysteine synthase B (290 aa)
  0.974
Slin_1589
Cysteine synthase (302 aa)
  0.974
Slin_4776
Pyridoxal-5’-phosphate-dependent protein subunit beta (355 aa)
 
  0.970
Slin_4514
Aspartate kinase (818 aa)
   
  0.962
Slin_4250
Methionine synthase (1261 aa)
   
 
  0.958
Slin_5820
vitamin-B12 independent methionine synthase (342 aa)
   
 
  0.944
metE
5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation (775 aa)
   
 
  0.944
Slin_1559
vitamin-B12 independent methionine synthase (369 aa)
   
 
  0.940
Slin_0217
O-acetylhomoserine/O-acetylserine sulfhydrylase (437 aa)
 
 
0.927
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]