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Slin_1714 protein (Spirosoma linguale) - STRING interaction network
"Slin_1714" - Peptidase M48 Ste24p in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1714Peptidase M48 Ste24p (708 aa)    
Predicted Functional Partners:
Slin_1715
Glycerophosphoryl diester phosphodiesterase (297 aa)
              0.721
Slin_2380
Hypothetical protein (155 aa)
   
          0.709
Slin_4506
Hypothetical protein (436 aa)
   
          0.695
Slin_5238
Hypothetical protein (150 aa)
   
          0.651
Slin_6228
RagB/SusD domain-containing protein (511 aa)
   
          0.613
Slin_4135
Hypothetical protein (291 aa)
   
          0.613
Slin_1713
Luciferase family oxidoreductase, group 1 (338 aa)
              0.586
Slin_2765
RagB/SusD domain-containing protein (542 aa)
   
          0.579
Slin_4223
Hypothetical protein (542 aa)
   
          0.577
Slin_2926
Heavy metal transport/detoxification protein (71 aa)
   
          0.569
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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