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Slin_1722 protein (Spirosoma linguale) - STRING interaction network
"Slin_1722" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1722Hypothetical protein (381 aa)    
Predicted Functional Partners:
Slin_1721
Hypothetical protein (455 aa)
 
          0.913
Slin_1222
Hypothetical protein (589 aa)
   
          0.666
Slin_5007
Hypothetical protein (568 aa)
   
          0.657
Slin_1720
TonB-dependent receptor plug (760 aa)
              0.641
Slin_4246
alpha-L-rhamnosidase (793 aa)
   
        0.588
Slin_1945
alpha-L-rhamnosidase (819 aa)
   
        0.548
Slin_1249
alpha-L-rhamnosidase (951 aa)
   
          0.534
Slin_1719
Glycoside hydrolase family protein (922 aa)
 
          0.524
Slin_4218
PKD domain-containing protein (788 aa)
   
          0.518
Slin_6339
FG-GAP repeat-containing protein (406 aa)
   
          0.499
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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