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Slin_1724 protein (Spirosoma linguale) - STRING interaction network
"Slin_1724" - Signal transduction histidine kinase LytS in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1724Signal transduction histidine kinase LytS (395 aa)    
Predicted Functional Partners:
Slin_1723
LytTR family transcriptional regulator (232 aa)
 
 
  0.979
Slin_0330
LytTR family transcriptional regulator (254 aa)
 
 
  0.894
Slin_3594
LytTR family transcriptional regulator (260 aa)
 
 
  0.888
Slin_2906
LytTR family transcriptional regulator (245 aa)
 
 
  0.880
Slin_1794
LytTR family transcriptional regulator (260 aa)
 
 
  0.857
Slin_5133
LytTR family transcriptional regulator (227 aa)
 
 
  0.856
Slin_0421
LytTR family transcriptional regulator (227 aa)
 
 
  0.856
Slin_1836
LytTR family transcriptional regulator (258 aa)
 
 
  0.854
Slin_2868
LytTR family transcriptional regulator (259 aa)
 
 
  0.854
Slin_0837
Response regulator receiver protein (153 aa)
 
 
  0.854
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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