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Slin_1748 protein (Spirosoma linguale) - STRING interaction network
"Slin_1748" - Type 12 methyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1748Type 12 methyltransferase (218 aa)    
Predicted Functional Partners:
Slin_1747
Glycoside hydrolase family protein (778 aa)
              0.644
Slin_0846
Metallophosphoesterase (371 aa)
   
          0.622
Slin_1746
Hypothetical protein (191 aa)
              0.585
Slin_1745
Hypothetical protein (185 aa)
              0.585
Slin_6571
Ig family protein (1342 aa)
   
          0.535
Slin_3953
Quinoprotein glucose dehydrogenase (747 aa)
   
          0.498
Slin_1132
PQQ-dependent enzyme-like protein (701 aa)
   
          0.495
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.494
Slin_3008
Hypothetical protein (419 aa)
   
          0.490
Slin_2450
PQQ-dependent enzyme-like protein (718 aa)
   
          0.465
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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