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Slin_1758 protein (Spirosoma linguale) - STRING interaction network
"Slin_1758" - Saccharopine dehydrogenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1758Saccharopine dehydrogenase (407 aa)    
Predicted Functional Partners:
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner (366 aa)
     
 
    0.935
Slin_5492
Proteinase inhibitor I4 serpin (412 aa)
     
 
    0.934
Slin_6485
Peptidase C1A papain (494 aa)
     
 
    0.767
Slin_5291
Peptidase C1A papain (354 aa)
     
 
    0.767
Slin_4538
Hypothetical protein (225 aa)
     
 
    0.651
Slin_1833
Hypothetical protein (476 aa)
     
 
    0.651
Slin_1759
PadR family transcriptional regulator (120 aa)
              0.627
Slin_3272
Hypothetical protein (402 aa)
   
          0.483
Slin_1393
Aminoglycoside phosphotransferase (363 aa)
   
          0.418
Slin_1076
acyl-CoA dehydrogenase domain-containing protein (606 aa)
   
          0.409
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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