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Slin_1781 protein (Spirosoma linguale) - STRING interaction network
"Slin_1781" - OmpA/MotB domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1781OmpA/MotB domain-containing protein (658 aa)    
Predicted Functional Partners:
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (216 aa)
              0.880
Slin_3223
Gliding motility-associated protein GldM (528 aa)
   
          0.766
Slin_3226
Hypothetical protein (324 aa)
   
          0.762
Slin_1304
Hypothetical protein (301 aa)
   
          0.753
Slin_3219
Hypothetical protein (749 aa)
   
          0.749
Slin_1912
Periplasmic component of the Tol biopolymer transport system-like protein (512 aa)
   
 
  0.746
Slin_6621
Hypothetical protein (2541 aa)
   
          0.744
Slin_5728
OmpA/MotB domain-containing protein (294 aa)
   
 
 
  0.743
Slin_5515
Gliding motility-associated lipoprotein GldJ (420 aa)
   
          0.741
Slin_0660
Hypothetical protein (223 aa)
   
          0.718
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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