STRINGSTRING
Slin_1797 protein (Spirosoma linguale) - STRING interaction network
"Slin_1797" - Exodeoxyribonuclease V in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1797Exodeoxyribonuclease V (1120 aa)    
Predicted Functional Partners:
Slin_1976
Conjugative relaxase domain-containing protein (919 aa)
   
  0.967
Slin_1461
Exonuclease V subunit alpha (496 aa)
   
  0.967
Slin_1376
HRDC domain-containing protein (829 aa)
   
  0.967
Slin_1658
Hypothetical protein (1039 aa)
 
     
  0.861
Slin_1798
PA-phosphatase-like phosphoesterase (290 aa)
              0.859
Slin_1799
Hypothetical protein (103 aa)
              0.815
Slin_6518
Hypothetical protein (309 aa)
   
          0.754
Slin_1800
5,10-methylenetetrahydrofolate reductase (319 aa)
              0.701
Slin_1309
Hypothetical protein (614 aa)
   
          0.675
Slin_2040
Sporulation domain-containing protein (380 aa)
   
          0.636
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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