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Slin_1805 protein (Spirosoma linguale) - STRING interaction network
"Slin_1805" - Sugar (pentulose and hexulose) kinase-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1805Sugar (pentulose and hexulose) kinase-like protein (474 aa)    
Predicted Functional Partners:
Slin_1804
Xylose isomerase (424 aa)
 
     
  0.939
Slin_1807
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose (104 aa)
 
     
  0.901
Slin_1802
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (701 aa)
 
     
  0.871
Slin_1806
Glycoside hydrolase family protein (378 aa)
 
          0.839
Slin_0954
GntR family transcriptional regulator (338 aa)
 
          0.779
Slin_3237
GntR family transcriptional regulator (365 aa)
 
          0.736
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.732
Slin_1476
Hypothetical protein (421 aa)
   
          0.669
Slin_1767
Hypothetical protein (411 aa)
   
          0.627
Slin_1448
Cytochrome C biogenesis protein CcmB (224 aa)
   
          0.615
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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