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Slin_1808 protein (Spirosoma linguale) - STRING interaction network
"Slin_1808" - BNR/Asp-box repeat domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1808BNR/Asp-box repeat domain-containing protein (348 aa)    
Predicted Functional Partners:
Slin_5622
Acetyl xylan esterase (407 aa)
 
          0.741
Slin_6214
Oxidoreductase domain-containing protein (340 aa)
   
          0.696
Slin_0604
Oxidoreductase domain-containing protein (327 aa)
   
          0.658
Slin_1806
Glycoside hydrolase family protein (378 aa)
 
          0.658
Slin_3971
Hypothetical protein (595 aa)
   
          0.642
Slin_5488
Xylose isomerase (285 aa)
 
          0.620
Slin_1805
Sugar (pentulose and hexulose) kinase-like protein (474 aa)
 
          0.604
Slin_0108
Hypothetical protein (668 aa)
   
          0.572
Slin_5374
Glycoside hydrolase family protein (442 aa)
   
          0.554
Slin_1249
alpha-L-rhamnosidase (951 aa)
          0.547
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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