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Slin_1810 protein (Spirosoma linguale) - STRING interaction network
"Slin_1810" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1810Hypothetical protein (341 aa)    
Predicted Functional Partners:
Slin_1811
ABC transporter (251 aa)
 
   
    0.983
Slin_1812
Hypothetical protein (271 aa)
 
   
    0.979
Slin_5158
Hypothetical protein (243 aa)
 
   
    0.904
Slin_5159
ABC transporter (248 aa)
       
    0.859
Slin_4901
Hypothetical protein (328 aa)
   
   
    0.847
Slin_2732
Hypothetical protein (449 aa)
   
          0.600
Slin_2362
Outer membrane efflux protein (446 aa)
   
          0.592
Slin_2733
Hypothetical protein (570 aa)
   
          0.578
Slin_2814
Hypothetical protein (1224 aa)
   
          0.571
Slin_0784
Hypothetical protein (466 aa)
 
          0.497
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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