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Slin_1821 protein (Spirosoma linguale) - STRING interaction network
"Slin_1821" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1821Hypothetical protein (182 aa)    
Predicted Functional Partners:
kptA
Phosphotransferase KptA/Tpt1; Removes the 2’-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1’’-2’’-cyclic phosphate (APPR>P). May function as an ADP- ribosylase (182 aa)
 
          0.785
Slin_0652
NUDIX hydrolase (254 aa)
 
          0.568
Slin_0357
NUDIX hydrolase (257 aa)
 
          0.556
Slin_2633
NUDIX hydrolase (251 aa)
 
          0.537
Slin_1240
NUDIX hydrolase (233 aa)
 
          0.531
Slin_4671
NUDIX hydrolase (257 aa)
 
          0.523
Slin_5424
NUDIX hydrolase (254 aa)
 
          0.514
Slin_0350
NUDIX hydrolase (233 aa)
 
          0.503
Slin_1491
Hypothetical protein (368 aa)
   
          0.467
Slin_1820
Hypothetical protein (158 aa)
              0.438
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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