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Slin_1825 protein (Spirosoma linguale) - STRING interaction network
"Slin_1825" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1825Hypothetical protein (411 aa)    
Predicted Functional Partners:
Slin_1826
BadM/Rrf2 family transcriptional regulator (153 aa)
 
          0.958
Slin_1827
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron-sulfur clusters (242 aa)
 
          0.861
Slin_1746
Hypothetical protein (191 aa)
   
          0.741
Slin_2852
Hypothetical protein (759 aa)
   
          0.739
Slin_3257
Hypothetical protein (185 aa)
   
          0.720
Slin_5832
Hypothetical protein (102 aa)
   
          0.641
Slin_1176
Hypothetical protein (120 aa)
   
          0.634
Slin_0137
Kelch repeat-containing protein (1656 aa)
   
          0.634
Slin_0339
Hypothetical protein (230 aa)
   
          0.602
Slin_3544
Hypothetical protein (318 aa)
   
          0.594
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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