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Slin_1841 protein (Spirosoma linguale) - STRING interaction network
"Slin_1841" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1841Hypothetical protein (438 aa)    
Predicted Functional Partners:
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.755
Slin_3336
Hypothetical protein (360 aa)
   
          0.749
Slin_4946
Hypothetical protein (711 aa)
   
          0.746
Slin_6416
Hypothetical protein (364 aa)
   
          0.745
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.738
Slin_1840
RND family efflux transporter MFP subunit (365 aa)
              0.700
Slin_5991
Peptidase S8/S53 subtilisin kexin sedolisin (1343 aa)
   
          0.681
Slin_6188
TonB family protein (804 aa)
   
          0.659
Slin_3858
Lipopolysaccharide biosynthesis protein (735 aa)
   
          0.648
Slin_3020
Histidine kinase (1282 aa)
   
          0.619
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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