STRINGSTRING
Slin_1844 protein (Spirosoma linguale) - STRING interaction network
"Slin_1844" - Sodium/hydrogen exchanger in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1844Sodium/hydrogen exchanger (410 aa)    
Predicted Functional Partners:
Slin_4248
beta-Ig-H3/fasciclin (183 aa)
     
 
    0.643
Slin_3070
beta-Ig-H3/fasciclin (354 aa)
     
 
    0.643
Slin_1399
beta-Ig-H3/fasciclin (192 aa)
     
 
    0.643
Slin_0542
beta-Ig-H3/fasciclin (330 aa)
     
 
    0.643
Slin_0114
beta-Ig-H3/fasciclin (337 aa)
     
 
    0.643
Slin_1846
Hypothetical protein (390 aa)
 
          0.599
Slin_1845
Hypothetical protein (98 aa)
              0.558
Slin_3556
ATPase P (836 aa)
   
  0.534
Slin_0865
Hypothetical protein (151 aa)
   
          0.466
Slin_2319
Glutamate synthase (1524 aa)
   
        0.461
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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