STRINGSTRING
Slin_1852 protein (Spirosoma linguale) - STRING interaction network
"Slin_1852" - Flavin-containing monooxygenase FMO in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1852Flavin-containing monooxygenase FMO (378 aa)    
Predicted Functional Partners:
Slin_1853
Hypothetical protein (149 aa)
              0.697
Slin_1851
CsbD family protein (61 aa)
              0.669
Slin_1649
Nitrilase (301 aa)
 
   
  0.649
Slin_0451
Cytochrome P450 (454 aa)
 
 
 
  0.525
Slin_6225
Pyridoxamine 5’-phosphate oxidase-like FMN-binding protein (206 aa)
   
          0.442
Slin_3075
Alpha/beta hydrolase (328 aa)
   
          0.431
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (685 aa)
       
      0.418
Slin_4183
GHMP kinase (347 aa)
   
          0.415
Slin_2209
Hypothetical protein (236 aa)
   
        0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]