STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1864PFAM: protein of unknown function DUF323; KEGG: dal:Dalk_3476 protein of unknown function DUF323. (668 aa)    
Predicted Functional Partners:
Slin_6530
PFAM: RagB/SusD domain protein.
  
     0.580
Slin_2765
PFAM: RagB/SusD domain protein.
  
     0.528
Slin_1863
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hypothetical protein.
       0.520
Slin_2764
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.501
Slin_6531
PFAM: cell surface receptor IPT/TIG domain protein; SMART: cell surface receptor IPT/TIG domain protein; KEGG: rpd:RPD_3003 outer membrane autotransporter barrel.
  
     0.487
Slin_6529
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.483
Slin_0345
PFAM: sulfatase; KEGG: swd:Swoo_3661 sulfatase.
 
   0.478
Slin_6371
PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: dol:Dole_0926 O-methyltransferase family protein.
  
     0.467
Slin_0583
PFAM: sulfatase; KEGG: pat:Patl_0881 sulfatase.
 
   0.443
Slin_1865
KEGG: bja:bll5175 hypothetical protein.
       0.432
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.