STRINGSTRING
Slin_1867 protein (Spirosoma linguale) - STRING interaction network
"Slin_1867" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1867Beta-lactamase (517 aa)    
Predicted Functional Partners:
Slin_5564
Beta-lactamase (693 aa)
 
     
  0.793
Slin_2778
Beta-lactamase (380 aa)
   
     
  0.779
Slin_2207
Beta-lactamase (404 aa)
   
     
  0.778
Slin_4637
Beta-lactamase (491 aa)
   
     
  0.762
Slin_1866
Peptidase M28 (503 aa)
 
          0.685
Slin_1868
Peptidase M20 (508 aa)
              0.614
Slin_1869
Hypothetical protein (34 aa)
              0.493
Slin_1870
Hypothetical protein (182 aa)
              0.450
Slin_2704
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (660 aa)
 
          0.424
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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