STRINGSTRING
Slin_1868 protein (Spirosoma linguale) - STRING interaction network
"Slin_1868" - Peptidase M20 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1868Peptidase M20 (508 aa)    
Predicted Functional Partners:
Slin_1869
Hypothetical protein (34 aa)
              0.676
Slin_1870
Hypothetical protein (182 aa)
   
        0.636
Slin_1867
Beta-lactamase (517 aa)
              0.614
Slin_3913
Peptidase M20 (440 aa)
 
     
  0.597
Slin_0407
Argininosuccinate synthase (400 aa)
   
 
  0.562
Slin_3346
Peptidase M20 (453 aa)
 
     
  0.553
argC
N-acetyl-gamma-glutamyl-phosphate reductase (327 aa)
   
 
  0.550
gidA
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (620 aa)
     
 
  0.499
argH
Argininosuccinate lyase (445 aa)
   
   
  0.494
Slin_1156
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein (320 aa)
   
   
  0.491
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (13%) [HD]