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Slin_1872 protein (Spirosoma linguale) - STRING interaction network
"Slin_1872" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1872Hypothetical protein (401 aa)    
Predicted Functional Partners:
Slin_1875
Hypothetical protein (147 aa)
 
          0.958
Slin_1874
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein (317 aa)
 
          0.949
Slin_1873
Lipoprotein (76 aa)
              0.840
Slin_6200
Type I phosphodiesterase/nucleotide pyrophosphatase (413 aa)
   
          0.696
Slin_4224
TonB-dependent receptor plug (1063 aa)
   
          0.681
Slin_4223
Hypothetical protein (542 aa)
   
          0.679
Slin_1876
Rieske (2Fe-2S) domain-containing protein (179 aa)
              0.672
Slin_6142
TonB-dependent receptor (857 aa)
   
          0.670
Slin_1769
TonB-dependent receptor plug (1085 aa)
   
          0.624
Slin_3836
Alcohol dehydrogenase zinc-binding domain-containing protein (325 aa)
   
          0.616
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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