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Slin_1890 protein (Spirosoma linguale) - STRING interaction network
"Slin_1890" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1890Hypothetical protein (171 aa)    
Predicted Functional Partners:
Slin_1891
Glucose-methanol-choline oxidoreductase (570 aa)
 
          0.941
Slin_6563
Glucose-methanol-choline oxidoreductase (569 aa)
   
          0.778
Slin_5806
Glucose-methanol-choline oxidoreductase (570 aa)
   
          0.778
Slin_5620
Glucose-methanol-choline oxidoreductase (579 aa)
   
          0.778
Slin_4949
Glucose-methanol-choline oxidoreductase (574 aa)
   
          0.778
Slin_4690
Glucose-methanol-choline oxidoreductase (570 aa)
   
          0.778
Slin_1025
Choline dehydrogenase (573 aa)
   
          0.778
Slin_0454
Glucose-methanol-choline oxidoreductase (570 aa)
   
          0.778
Slin_5809
Hypothetical protein (43 aa)
   
          0.772
Slin_4771
Hypothetical protein (268 aa)
   
          0.728
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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