STRINGSTRING
Slin_1918 protein (Spirosoma linguale) - STRING interaction network
"Slin_1918" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1918Hypothetical protein (455 aa)    
Predicted Functional Partners:
Slin_1917
PhoH family protein (321 aa)
              0.862
Slin_1920
ComEC/Rec2-like protein (708 aa)
              0.805
Slin_1919
N-acetyltransferase GCN5 (150 aa)
              0.805
Slin_0566
Hypothetical protein (1086 aa)
   
          0.723
Slin_2797
Hypothetical protein (1343 aa)
   
          0.676
Slin_5852
Hypothetical protein (623 aa)
   
          0.665
Slin_5235
Hypothetical protein (425 aa)
   
          0.626
Slin_5644
Geranylgeranylglyceryl phosphate synthase (249 aa)
   
          0.622
Slin_0229
Hypothetical protein (963 aa)
   
          0.567
Slin_3443
Hypothetical protein (952 aa)
   
          0.559
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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