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Slin_1920 protein (Spirosoma linguale) - STRING interaction network
"Slin_1920" - ComEC/Rec2-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1920ComEC/Rec2-like protein (708 aa)    
Predicted Functional Partners:
Slin_1919
N-acetyltransferase GCN5 (150 aa)
              0.861
Slin_1917
PhoH family protein (321 aa)
              0.819
Slin_1918
Hypothetical protein (455 aa)
              0.805
Slin_2383
DNA protecting protein DprA (370 aa)
 
   
  0.790
Slin_5516
Phosphoribosyltransferase (239 aa)
 
   
  0.743
Slin_4052
Mg chelatase subunit ChlI (513 aa)
   
   
  0.724
rsfS
Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (131 aa)
 
        0.691
Slin_6394
Peptidase M22 glycoprotease (235 aa)
 
          0.631
Slin_1937
DNA polymerase III subunit delta (344 aa)
 
        0.594
Slin_5877
Hypothetical protein (117 aa)
   
        0.584
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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