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Slin_1924 protein (Spirosoma linguale) - STRING interaction network
"Slin_1924" - ABC transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1924ABC transporter (441 aa)    
Predicted Functional Partners:
Slin_1923
Hypothetical protein (218 aa)
 
          0.935
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) (244 aa)
   
 
  0.756
Slin_3186
Type 12 methyltransferase (245 aa)
   
 
  0.647
Slin_2534
3-demethylubiquinone-9 3-methyltransferase (241 aa)
     
 
  0.545
Slin_0447
Lycopene beta and epsilon cyclase (393 aa)
   
          0.533
Slin_2319
Glutamate synthase (1524 aa)
   
   
  0.526
Slin_2045
Histidine kinase (906 aa)
   
 
  0.525
Slin_1007
Short-chain dehydrogenase/reductase SDR (233 aa)
 
        0.487
Slin_2149
Monooxygenase FAD-binding protein (391 aa)
     
 
  0.487
Slin_2116
Monooxygenase FAD-binding protein (384 aa)
     
 
  0.487
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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