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Slin_1927 protein (Spirosoma linguale) - STRING interaction network
"Slin_1927" - CMP/dCMP deaminase zinc-binding protein in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1927CMP/dCMP deaminase zinc-binding protein (186 aa)    
Predicted Functional Partners:
thyA
Thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (264 aa)
   
  0.966
tdk
Thymidine kinase (209 aa)
   
 
  0.915
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (258 aa)
         
  0.905
cmk
Cytidylate kinase (233 aa)
       
    0.901
Slin_5585
5’-nucleotidase (340 aa)
         
    0.900
Slin_1928
Hypothetical protein (206 aa)
              0.861
Slin_1929
Hypothetical protein (149 aa)
              0.859
Slin_1926
Glycerate kinase (371 aa)
              0.684
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (432 aa)
         
  0.564
Slin_1925
Oxidoreductase domain-containing protein (340 aa)
   
        0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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