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Slin_1952 protein (Spirosoma linguale) - STRING interaction network
"Slin_1952" - Acetyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1952Acetyltransferase (191 aa)    
Predicted Functional Partners:
Slin_6296
Transferase (184 aa)
   
          0.756
Slin_1951
Cupin (131 aa)
              0.752
Slin_1950
Peptidase S15 (372 aa)
 
          0.723
Slin_1579
Hypothetical protein (179 aa)
   
        0.700
Slin_6307
Capsular exopolysaccharide family protein (772 aa)
   
   
  0.689
Slin_4091
Satase isoform II (178 aa)
 
   
  0.590
Slin_4813
dTDP-4-dehydrorhamnose 3,5-epimerase (173 aa)
   
   
  0.538
Slin_0434
dTDP-4-dehydrorhamnose 3,5-epimerase (181 aa)
   
   
  0.538
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.536
Slin_4071
UDP-N-acetylglucosamine 2-epimerase (368 aa)
   
   
  0.512
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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