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pnp protein (Spirosoma linguale) - STRING interaction network
"pnp" - Polyribonucleotide nucleotidyltransferase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (708 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1271 aa)
   
  0.971
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1449 aa)
   
 
  0.966
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (329 aa)
   
  0.961
Slin_5094
Adenylate kinase (202 aa)
     
 
  0.941
Slin_4063
Pyruvate kinase (488 aa)
   
 
  0.937
Slin_2388
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (244 aa)
   
 
  0.927
Slin_6359
Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (826 aa)
     
 
  0.919
cmk
Cytidylate kinase (233 aa)
   
 
  0.916
Slin_6029
Nucleoside-diphosphate kinase (139 aa)
   
 
  0.915
Slin_5045
Ribonucleoside-diphosphate reductase (349 aa)
   
 
  0.903
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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