STRINGSTRING
Slin_2013 protein (Spirosoma linguale) - STRING interaction network
"Slin_2013" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2013Hypothetical protein (597 aa)    
Predicted Functional Partners:
hemL
Glutamate-1-semialdehyde-2,1-aminomutase (451 aa)
              0.873
Slin_2011
Family 2 glycosyl transferase (335 aa)
              0.859
yidC
Membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (621 aa)
 
          0.817
Slin_3080
Hypothetical protein (1564 aa)
   
          0.778
Slin_3223
Gliding motility-associated protein GldM (528 aa)
   
          0.777
Slin_2018
Hypothetical protein (686 aa)
   
          0.777
Slin_5122
Hypothetical protein (1005 aa)
   
          0.776
Slin_2001
Hypothetical protein (500 aa)
   
          0.776
Slin_2039
Hypothetical protein (558 aa)
   
          0.775
Slin_5161
Hypothetical protein (428 aa)
   
          0.771
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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