STRINGSTRING
Slin_2067 protein (Spirosoma linguale) - STRING interaction network
"Slin_2067" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2067Response regulator receiver protein (320 aa)    
Predicted Functional Partners:
Slin_2066
Hypothetical protein (404 aa)
              0.731
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.610
Slin_5520
Type 12 methyltransferase (306 aa)
   
          0.545
Slin_3340
Hypothetical protein (263 aa)
   
          0.518
Slin_3726
LytTR family transcriptional regulator (252 aa)
   
          0.512
Slin_2451
Hypothetical protein (257 aa)
   
          0.499
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.457
Slin_0361
Alpha amylase (958 aa)
   
          0.451
Slin_1582
TonB-dependent receptor plug (853 aa)
   
          0.447
Slin_2828
Hypothetical protein (364 aa)
   
          0.446
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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