STRINGSTRING
Slin_2079 protein (Spirosoma linguale) - STRING interaction network
"Slin_2079" - Nitroreductase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2079Nitroreductase (209 aa)    
Predicted Functional Partners:
Slin_2078
HxlR family transcriptional regulator (141 aa)
   
        0.720
Slin_2319
Glutamate synthase (1524 aa)
   
   
  0.461
Slin_1650
Peptidase S8/S53 subtilisin kexin sedolisin (557 aa)
     
      0.443
Slin_6479
Peptidase S8/S53 subtilisin kexin sedolisin (739 aa)
       
      0.442
Slin_5989
Peptidase S8/S53 subtilisin kexin sedolisin (535 aa)
       
      0.442
Slin_4678
Peptidase S8/S53 subtilisin kexin sedolisin (407 aa)
       
      0.442
Slin_3456
Peptidase S8/S53 subtilisin kexin sedolisin (515 aa)
       
      0.442
Slin_2783
Peptidase S8/S53 subtilisin kexin sedolisin (555 aa)
       
      0.442
Slin_2707
Hypothetical protein (478 aa)
       
      0.442
Slin_1710
Peptidase S8/S53 subtilisin kexin sedolisin (396 aa)
       
      0.442
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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