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Slin_2119 protein (Spirosoma linguale) - STRING interaction network
"Slin_2119" - IstB domain-containing protein ATP-binding protein in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2119IstB domain-containing protein ATP-binding protein (247 aa)    
Predicted Functional Partners:
Slin_1916
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (529 aa)
     
  0.934
Slin_2120
Integrase catalytic protein (513 aa)
     
  0.831
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (703 aa)
       
  0.792
Slin_0543
DNA polymerase I (1024 aa)
   
   
  0.718
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (469 aa)
     
 
  0.509
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (804 aa)
         
  0.504
Slin_0850
Integrase catalytic protein (513 aa)
     
  0.470
Slin_6163
Integrase catalytic protein (513 aa)
     
  0.470
Slin_5580
Integrase catalytic protein (513 aa)
     
  0.470
Slin_5321
Integrase catalytic protein (513 aa)
     
  0.470
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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