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Slin_2121 protein (Spirosoma linguale) - STRING interaction network
"Slin_2121" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2121Hypothetical protein (1837 aa)    
Predicted Functional Partners:
Slin_2123
Hypothetical protein (1073 aa)
 
          0.798
Slin_1490
Hypothetical protein (348 aa)
   
          0.743
Slin_2122
Hypothetical protein (892 aa)
              0.709
Slin_6214
Oxidoreductase domain-containing protein (340 aa)
   
          0.706
Slin_5622
Acetyl xylan esterase (407 aa)
   
          0.703
Slin_0604
Oxidoreductase domain-containing protein (327 aa)
   
          0.686
Slin_5488
Xylose isomerase (285 aa)
   
          0.661
Slin_2647
Sugar permease (331 aa)
   
          0.610
Slin_4229
ABC transporter (726 aa)
   
          0.606
Slin_4701
ABC transporter (728 aa)
   
          0.604
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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