STRINGSTRING
Slin_2123 protein (Spirosoma linguale) - STRING interaction network
"Slin_2123" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2123Hypothetical protein (1073 aa)    
Predicted Functional Partners:
Slin_2121
Hypothetical protein (1837 aa)
 
          0.798
Slin_1490
Hypothetical protein (348 aa)
   
          0.683
Slin_4701
ABC transporter (728 aa)
   
          0.630
Slin_4229
ABC transporter (726 aa)
   
          0.617
Slin_1623
ABC transporter (735 aa)
   
          0.617
Slin_0781
ABC transporter (827 aa)
   
          0.596
Slin_0890
ABC transporter (771 aa)
   
          0.591
Slin_2611
GntR family transcriptional regulator (479 aa)
   
      0.569
Slin_0429
Hypothetical protein (636 aa)
   
          0.563
Slin_0428
Transglutaminase (678 aa)
   
          0.558
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]