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Slin_2138 protein (Spirosoma linguale) - STRING interaction network
"Slin_2138" - PAS/PAC sensor protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2138PAS/PAC sensor protein (849 aa)    
Predicted Functional Partners:
Slin_2508
PAS/PAC sensor hybrid histidine kinase (784 aa)
 
 
  0.816
Slin_4150
Response regulator receiver protein (160 aa)
 
 
  0.712
Slin_1989
CheR-type MCP methyltransferase with PAS/PAC sensor (1110 aa)
 
 
  0.704
Slin_5265
CheB methylesterase (329 aa)
   
  0.683
Slin_5222
Response regulator receiver protein (160 aa)
   
 
  0.664
Slin_4374
Response regulator receiver protein (155 aa)
   
 
  0.664
Slin_2718
Response regulator receiver protein (153 aa)
   
 
  0.664
Slin_1229
Response regulator receiver protein (154 aa)
   
 
  0.664
Slin_0753
Response regulator receiver protein (146 aa)
   
 
  0.664
Slin_0384
Response regulator receiver protein (143 aa)
   
 
  0.664
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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