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Slin_2145 protein (Spirosoma linguale) - STRING interaction network
"Slin_2145" - Alpha/beta hydrolase fold protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2145Alpha/beta hydrolase fold protein (477 aa)    
Predicted Functional Partners:
Slin_2144
Esterase (400 aa)
              0.845
Slin_2143
AraC family transcriptional regulator (269 aa)
 
          0.719
Slin_1769
TonB-dependent receptor plug (1085 aa)
   
          0.650
menD
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) (582 aa)
   
   
  0.574
Slin_2886
Hypothetical protein (326 aa)
   
          0.574
Slin_4223
Hypothetical protein (542 aa)
   
          0.569
Slin_2758
Hypothetical protein (170 aa)
   
          0.555
Slin_5816
Oxidoreductase domain-containing protein (397 aa)
 
        0.554
Slin_4224
TonB-dependent receptor plug (1063 aa)
   
          0.549
Slin_6350
Class I and II aminotransferase (360 aa)
   
 
  0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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