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Slin_2158 protein (Spirosoma linguale) - STRING interaction network
"Slin_2158" - G-D-S-L family lipolytic protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2158G-D-S-L family lipolytic protein (226 aa)    
Predicted Functional Partners:
Slin_3859
Polysaccharide biosynthesis protein (461 aa)
   
          0.741
Slin_3875
Urease accessory protein (208 aa)
   
          0.606
Slin_4809
phytanoyl-CoA dioxygenase (273 aa)
   
          0.603
Slin_4231
Lantibiotic dehydratase domain-containing protein (962 aa)
   
          0.589
Slin_1805
Sugar (pentulose and hexulose) kinase-like protein (474 aa)
   
          0.516
Slin_3191
Acyl carrier protein (86 aa)
   
          0.508
Slin_2157
PadR family transcriptional regulator (112 aa)
              0.502
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.494
Slin_3992
Hypothetical protein (532 aa)
   
          0.493
Slin_0630
Hypothetical protein (204 aa)
   
          0.491
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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