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Slin_2167 protein (Spirosoma linguale) - STRING interaction network
"Slin_2167" - Cytochrome-c oxidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2167Cytochrome-c oxidase (657 aa)    
Predicted Functional Partners:
Slin_5675
Cytochrome C oxidase subunit III (265 aa)
  0.999
Slin_5670
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
 
  0.999
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (292 aa)
 
  0.986
Slin_4170
Peptidase M16 domain-containing protein (969 aa)
     
    0.949
Slin_3480
Peptidase M16 domain-containing protein (411 aa)
     
    0.949
Slin_1835
Peptidase M16 domain-containing protein (949 aa)
     
    0.949
Slin_1834
Peptidase M16 domain-containing protein (934 aa)
     
    0.949
Slin_0019
Peptidase M16 domain-containing protein (413 aa)
     
    0.949
Slin_5951
Peptidase M16 domain-containing protein (426 aa)
     
    0.948
Slin_5792
Peptidase M16 domain-containing protein (458 aa)
     
    0.948
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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