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Slin_2186 protein (Spirosoma linguale) - STRING interaction network
"Slin_2186" - Short-chain dehydrogenase/reductase SDR in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2186Short-chain dehydrogenase/reductase SDR (248 aa)    
Predicted Functional Partners:
Slin_2185
Carboxylesterase type B (553 aa)
              0.676
Slin_2184
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein (736 aa)
              0.524
Slin_2183
Molybdopterin dehydrogenase FAD-binding protein (316 aa)
              0.524
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
   
      0.514
Slin_0197
Short-chain dehydrogenase/reductase SDR (280 aa)
 
 
  0.440
Slin_5372
Antibiotic biosynthesis monooxygenase (123 aa)
   
          0.440
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (254 aa)
       
      0.432
Slin_2182
(2Fe-2S)-binding domain-containing protein (212 aa)
              0.419
folE
GTP cyclohydrolase I (241 aa)
   
        0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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