STRINGSTRING
Slin_2192 protein (Spirosoma linguale) - STRING interaction network
"Slin_2192" - Short-chain dehydrogenase/reductase SDR in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2192Short-chain dehydrogenase/reductase SDR (256 aa)    
Predicted Functional Partners:
Slin_5157
Short-chain dehydrogenase/reductase SDR (224 aa)
   
          0.715
Slin_2191
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein (743 aa)
              0.669
Slin_2190
Molybdopterin dehydrogenase FAD-binding protein (339 aa)
              0.669
Slin_2189
(2Fe-2S)-binding domain-containing protein (215 aa)
              0.669
Slin_2193
Cupin (131 aa)
            0.560
Slin_2195
Cupin (189 aa)
              0.417
Slin_2194
Hypothetical protein (185 aa)
              0.417
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]