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Slin_2197 protein (Spirosoma linguale) - STRING interaction network
"Slin_2197" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2197Hypothetical protein (258 aa)    
Predicted Functional Partners:
Slin_2196
Type 12 methyltransferase (192 aa)
 
          0.551
Slin_0846
Metallophosphoesterase (371 aa)
   
          0.498
Slin_2782
ECF subfamily RNA polymerase sigma-24 subunit (414 aa)
   
          0.459
Slin_1586
TetR family transcriptional regulator (197 aa)
   
          0.459
Slin_0602
Hypothetical protein (453 aa)
   
          0.442
Slin_4789
Short-chain dehydrogenase/reductase SDR (293 aa)
   
          0.418
Slin_2504
Short-chain dehydrogenase/reductase SDR (285 aa)
   
          0.416
Slin_5616
Hypothetical protein (451 aa)
   
          0.411
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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