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Slin_2201 protein (Spirosoma linguale) - STRING interaction network
"Slin_2201" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2201Hypothetical protein (261 aa)    
Predicted Functional Partners:
Slin_2202
ABC transporter (301 aa)
 
          0.965
Slin_2203
AraC family transcriptional regulator (285 aa)
              0.602
Slin_2626
RagB/SusD domain-containing protein (507 aa)
   
          0.545
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.531
Slin_2627
TonB-dependent receptor plug (1117 aa)
   
          0.527
Slin_3875
Urease accessory protein (208 aa)
   
          0.511
Slin_0258
Hypothetical protein (210 aa)
   
          0.486
Slin_2200
PAS/PAC sensor signal transduction histidine kinase (678 aa)
              0.484
Slin_4268
Hypothetical protein (313 aa)
   
          0.454
Slin_0983
DoxX family protein (142 aa)
   
          0.452
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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